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PDBsum entry 9gtk
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Pore analysis for: 9gtk calculated with  MOLE 2.0
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PDB id
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9gtk
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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18 pores,
coloured by radius |
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22 pores,
coloured by radius
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22 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.32 |
3.24 |
25.8 |
-2.80 |
-0.48 |
37.9 |
78 |
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6 |
3 |
0 |
0 |
0 |
0 |
0 |
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2 |
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2.14 |
2.27 |
31.2 |
-1.67 |
-0.56 |
20.7 |
76 |
5 |
5 |
1 |
0 |
2 |
1 |
0 |
EDO 201 D
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3 |
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1.28 |
1.36 |
31.9 |
-2.20 |
-0.60 |
24.7 |
80 |
6 |
4 |
3 |
1 |
2 |
0 |
0 |
MG 213 A 1PE 208 B
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4 |
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2.15 |
2.26 |
38.7 |
-2.75 |
-0.48 |
36.1 |
78 |
8 |
7 |
1 |
0 |
2 |
1 |
0 |
EDO 201 D
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5 |
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2.12 |
3.36 |
40.3 |
-1.80 |
-0.52 |
25.7 |
82 |
5 |
3 |
2 |
2 |
1 |
1 |
0 |
GNP 211 C PGE 205 D
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6 |
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1.98 |
2.00 |
40.5 |
-1.44 |
-0.55 |
22.2 |
82 |
4 |
3 |
1 |
1 |
1 |
0 |
0 |
GNP 204 D
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7 |
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1.38 |
2.54 |
44.7 |
-1.76 |
-0.29 |
24.7 |
85 |
7 |
7 |
3 |
3 |
1 |
0 |
0 |
EDO 206 C GNP 211 C MG 202 I
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8 |
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1.39 |
2.41 |
48.6 |
-2.65 |
-0.49 |
34.3 |
79 |
11 |
6 |
2 |
2 |
1 |
0 |
0 |
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9 |
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1.39 |
2.80 |
54.2 |
-2.59 |
-0.58 |
31.6 |
79 |
10 |
8 |
3 |
2 |
1 |
1 |
0 |
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10 |
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1.84 |
1.84 |
57.1 |
-1.95 |
-0.51 |
23.7 |
74 |
8 |
5 |
1 |
1 |
2 |
3 |
0 |
EDO 202 A EDO 205 A EDO 206 A EDO 208 A EDO 202 C
EDO 203 C EDO 204 C
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11 |
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1.95 |
1.95 |
57.1 |
-0.98 |
-0.65 |
5.9 |
92 |
1 |
2 |
5 |
4 |
0 |
0 |
0 |
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12 |
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2.12 |
3.37 |
58.1 |
-1.90 |
-0.51 |
20.2 |
75 |
6 |
4 |
1 |
1 |
1 |
3 |
0 |
EDO 205 A PGE 205 D
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13 |
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1.40 |
1.40 |
73.4 |
-1.46 |
-0.54 |
15.3 |
88 |
3 |
5 |
5 |
6 |
1 |
0 |
0 |
EDO 209 C EDO 201 I MG 202 I
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14 |
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1.46 |
1.49 |
78.7 |
-1.64 |
-0.41 |
18.9 |
82 |
8 |
8 |
4 |
5 |
5 |
1 |
0 |
EDO 204 A EDO 205 A EDO 209 A EDO 210 A MG 213 A
EDO 204 C PGE 212 C
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15 |
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1.39 |
3.27 |
80.0 |
-1.69 |
-0.62 |
18.5 |
86 |
5 |
5 |
5 |
4 |
1 |
0 |
0 |
EDO 209 C EDO 201 I MG 202 I
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16 |
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1.39 |
3.26 |
86.2 |
-2.44 |
-0.58 |
32.4 |
83 |
10 |
10 |
3 |
4 |
1 |
0 |
0 |
EDO 201 I MG 202 I
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17 |
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1.95 |
1.94 |
86.2 |
-1.76 |
-0.55 |
20.4 |
87 |
10 |
5 |
5 |
4 |
0 |
0 |
0 |
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18 |
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1.94 |
1.95 |
91.8 |
-1.73 |
-0.61 |
18.5 |
87 |
8 |
6 |
6 |
4 |
0 |
1 |
0 |
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19 |
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2.54 |
3.87 |
93.5 |
-1.39 |
-0.40 |
16.1 |
84 |
7 |
5 |
7 |
5 |
4 |
1 |
0 |
EDO 205 A EDO 210 A EDO 204 C GNP 211 C PGE 212 C
PGE 205 D
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20 |
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1.67 |
2.84 |
98.4 |
-1.48 |
-0.64 |
15.1 |
88 |
4 |
5 |
6 |
6 |
0 |
0 |
0 |
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21 |
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1.64 |
2.83 |
105.6 |
-1.64 |
-0.72 |
16.3 |
86 |
5 |
6 |
6 |
4 |
0 |
0 |
0 |
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22 |
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2.21 |
2.21 |
110.8 |
-1.72 |
-0.51 |
18.8 |
84 |
8 |
9 |
7 |
3 |
3 |
1 |
0 |
EDO 205 A EDO 210 A EDO 204 C PGE 212 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program