 |
PDBsum entry 9grh
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 9grh calculated with  MOLE 2.0
|
PDB id
|
|
|
|
9grh
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
6 pores,
coloured by radius |
|
6 pores,
coloured by radius
|
6 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.11 |
2.25 |
58.2 |
-2.79 |
-0.55 |
29.0 |
84 |
|
10 |
3 |
6 |
2 |
1 |
1 |
0 |
|
|
 |
|
2 |
 |
2.32 |
5.48 |
68.8 |
-1.41 |
-0.33 |
19.6 |
77 |
8 |
5 |
4 |
1 |
3 |
1 |
0 |
|
|
3 |
 |
2.81 |
3.04 |
89.8 |
-2.02 |
-0.35 |
25.8 |
81 |
16 |
6 |
9 |
5 |
3 |
2 |
0 |
|
|
4 |
 |
2.06 |
2.22 |
98.8 |
-2.00 |
-0.40 |
24.9 |
83 |
17 |
7 |
9 |
6 |
2 |
1 |
0 |
|
|
5 |
 |
2.12 |
2.36 |
140.8 |
-2.33 |
-0.65 |
20.5 |
87 |
11 |
9 |
18 |
5 |
0 |
1 |
0 |
|
 |
6 |
 |
2.79 |
2.98 |
166.4 |
-1.85 |
-0.46 |
19.7 |
83 |
16 |
12 |
19 |
8 |
2 |
2 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program