PDBsum entry 9gpf Go to PDB code:  Tunnel analysis for: 9gpf calculated with MOLE 2.0 PDB id 9gpf Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.26 2.94 20.2 1.05 0.62 9.8 79 2 0 3 4 3 0 0   2 1.23 1.75 15.1 0.76 0.24 15.3 81 0 3 0 4 1 0 0   3 1.15 1.91 16.4 -0.68 -0.26 15.5 76 1 4 0 2 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.