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PDBsum entry 9gg5

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 9gg5 calculated with MOLE 2.0 PDB id
9gg5
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.70 2.27 54.5 -1.11 -0.38 17.5 84 5 2 3 3 2 0 0  
2 1.70 2.27 60.8 -1.44 -0.41 19.8 86 9 1 3 4 1 0 0  
3 1.84 3.93 82.1 -1.20 -0.39 15.0 81 8 5 7 3 3 2 4  
4 1.59 2.58 85.8 -1.52 -0.49 21.0 86 10 9 5 5 2 2 0  
5 1.59 2.56 86.4 -1.34 -0.39 22.5 85 9 7 4 8 0 2 0  
6 1.79 2.27 93.4 -1.10 -0.27 15.9 79 9 3 7 5 2 2 4  
7 1.61 2.57 121.8 -1.29 -0.36 18.5 82 14 10 9 8 3 4 4  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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