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PDBsum entry 9fv1

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 9fv1 calculated with MOLE 2.0 PDB id
9fv1
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 5.13 5.89 25.7 -2.14 -0.79 24.8 90 2 3 1 0 0 0 0  
2 2.67 2.69 35.9 -2.40 -0.49 21.7 89 5 2 3 2 1 0 0  
3 2.65 2.65 46.3 -2.54 -0.56 16.4 83 8 2 11 1 4 0 0  JSG 601 A
4 2.14 2.33 48.6 -1.86 -0.50 19.9 91 8 2 4 4 0 0 0  
5 3.62 3.83 49.1 -2.02 -0.48 10.4 88 3 3 9 1 3 0 0  JSG 601 A
6 1.44 2.54 51.7 2.97 0.83 0.5 87 0 0 1 15 1 0 0  JSG 601 A
7 1.26 2.85 54.7 -0.21 0.00 13.9 84 5 2 2 15 0 0 0  JSG 601 A
8 1.27 2.54 56.6 -2.54 -0.66 28.1 86 8 4 7 4 0 1 0  JSG 601 A
9 1.53 2.28 56.9 -0.74 -0.15 16.9 84 5 1 4 13 0 1 0  JSG 601 A
10 1.51 2.42 57.2 -2.16 -0.56 21.6 87 8 3 11 3 2 1 0  JSG 601 A
11 1.28 2.62 57.5 -2.62 -0.68 25.1 85 12 2 10 2 1 1 0  JSG 601 A
12 2.11 2.25 57.8 -1.78 -0.47 22.4 90 8 3 3 4 0 0 0  
13 1.54 2.32 58.6 -2.46 -0.64 23.1 86 9 2 11 2 1 1 0  JSG 601 A
14 1.52 2.26 61.0 -2.30 -0.60 19.2 87 4 3 12 2 3 1 0  JSG 601 A
15 1.26 2.62 62.1 -2.06 -0.66 14.2 91 4 4 12 3 2 0 0  JSG 601 A
16 1.13 1.27 66.8 0.35 0.17 11.8 88 5 2 5 16 1 0 0  JSG 601 A
17 1.60 1.86 67.6 -1.31 -0.23 18.2 86 10 0 9 11 1 0 0  JSG 601 A
18 1.64 1.87 73.1 -1.20 -0.21 14.9 86 5 2 9 11 3 0 0  JSG 601 A
19 1.22 1.36 80.4 -1.01 -0.26 11.3 91 8 0 14 5 4 0 0  JSG 601 A
20 1.23 2.56 116.5 -1.18 -0.27 17.1 86 8 3 9 12 4 1 0  JSG 601 A
21 1.18 1.31 145.1 -0.95 -0.24 13.7 86 11 6 15 18 5 1 0  JSG 601 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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