PDBsum entry 9fpy Go to PDB code:  Tunnel analysis for: 9fpy calculated with MOLE 2.0 PDB id 9fpy Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.32 59.7 0.19 -0.05 3.9 84 2 1 9 9 5 1 0   2 1.15 1.33 16.7 1.36 0.47 6.9 74 0 1 1 5 0 2 0   3 1.13 1.88 18.0 -1.17 -0.36 10.5 71 2 0 2 2 1 1 1   4 1.19 1.19 19.1 0.43 0.26 11.2 83 2 1 1 5 0 0 0   5 1.15 1.14 19.2 -0.61 -0.28 9.8 77 2 1 1 3 1 0 1   6 1.12 3.02 26.5 0.01 0.18 11.4 78 3 1 2 6 0 1 0   7 1.39 2.29 15.4 -0.67 0.03 18.2 73 4 0 1 2 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.