PDBsum entry 9fbd Go to PDB code:  Tunnel analysis for: 9fbd calculated with MOLE 2.0 PDB id 9fbd Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.85 23.5 0.20 0.16 15.6 79 4 0 0 5 0 0 0   2 1.34 1.84 24.8 -0.23 0.20 19.6 80 6 0 1 5 0 0 0   3 1.39 1.52 15.7 0.44 0.10 20.1 84 1 3 0 5 0 0 0   4 1.27 2.24 16.7 0.62 0.12 19.0 84 1 3 0 5 0 0 0   5 1.33 1.42 17.6 1.86 0.48 10.0 89 1 1 0 7 0 0 0   6 1.86 1.86 15.9 -1.31 -0.45 16.2 86 0 1 1 3 0 1 0   7 1.34 1.52 17.6 1.36 0.28 12.4 86 1 2 0 5 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.