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PDBsum entry 9f3c

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Pore analysis for: 9f3c calculated with MOLE 2.0 PDB id
9f3c
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.74 40.8 -2.07 -0.04 22.3 66 4 6 3 0 7 2 0  NAG 1 C NAG 2 C BMA 3 C
2 1.34 1.53 45.6 -0.27 -0.20 6.2 81 2 2 8 4 1 3 0  
3 1.71 1.83 52.6 -1.74 -0.39 23.6 81 7 5 5 4 1 0 0  
4 1.54 1.71 53.1 -0.97 -0.27 18.6 78 4 9 4 6 5 1 0  
5 1.33 1.52 55.1 -0.14 -0.08 9.3 80 2 2 9 6 2 3 0  
6 1.40 2.90 63.4 -0.62 -0.03 20.4 75 7 7 4 9 4 1 0  
7 1.30 1.86 65.5 -0.65 -0.15 7.0 83 3 3 12 8 3 4 0  
8 1.69 2.22 73.6 -0.90 -0.07 12.2 80 3 3 4 6 2 1 0  
9 1.73 1.83 89.6 -1.66 -0.35 21.4 80 9 6 7 8 2 1 0  
10 1.51 1.68 90.2 -1.14 -0.27 18.7 78 6 10 6 10 6 2 0  
11 1.47 1.55 272.8 -1.14 -0.28 19.0 79 14 14 19 15 6 3 3  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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