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PDBsum entry 9epr

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 9epr calculated with MOLE 2.0 PDB id
9epr
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.28 50.5 -0.44 0.27 2.8 80 0 1 5 6 9 0 0  RET 401 R
2 1.49 2.38 54.1 -0.87 -0.23 12.3 80 5 3 3 6 4 1 1  
3 1.28 1.28 57.9 -0.20 0.04 5.8 86 1 3 5 11 6 1 0  RET 401 R
4 1.28 1.51 60.0 -0.35 0.25 4.8 82 1 2 4 9 8 1 0  RET 401 R
5 1.74 1.90 69.6 -1.09 -0.44 15.5 87 7 4 6 6 1 2 0  
6 1.46 1.47 87.9 -0.21 -0.23 13.5 76 5 4 1 9 2 2 0  
7 1.46 2.38 90.0 -0.91 -0.29 12.6 84 7 4 7 11 3 3 1  
8 1.48 2.72 90.4 -0.25 -0.24 13.2 76 3 6 1 9 2 3 0  
9 1.40 2.23 104.1 -0.06 -0.09 7.9 81 6 5 9 12 5 3 3  
10 1.45 2.67 125.8 -0.15 -0.04 8.3 80 8 4 10 15 7 3 4  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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