 |
PDBsum entry 9ee9
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 9ee9 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
9ee9
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
10 pores,
coloured by radius |
|
11 pores,
coloured by radius
|
11 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.92 |
2.01 |
25.3 |
-0.86 |
-0.42 |
11.6 |
83 |
|
3 |
0 |
3 |
3 |
0 |
0 |
1 |
|
|
 |
|
2 |
 |
1.23 |
1.40 |
30.9 |
-0.10 |
0.23 |
12.8 |
82 |
2 |
2 |
1 |
6 |
2 |
0 |
1 |
ADN 400 A
|
|
3 |
 |
3.04 |
3.34 |
35.4 |
-1.43 |
-0.65 |
8.2 |
87 |
2 |
0 |
4 |
4 |
0 |
0 |
0 |
|
|
4 |
 |
3.02 |
3.13 |
35.9 |
-0.62 |
-0.41 |
10.5 |
84 |
3 |
0 |
3 |
3 |
0 |
0 |
0 |
|
|
5 |
 |
2.24 |
3.39 |
44.3 |
-2.34 |
-0.68 |
18.4 |
87 |
4 |
2 |
9 |
1 |
1 |
0 |
0 |
|
|
6 |
 |
2.24 |
3.38 |
50.2 |
-2.57 |
-0.73 |
18.4 |
83 |
3 |
2 |
8 |
1 |
1 |
0 |
0 |
|
|
7 |
 |
1.52 |
1.52 |
67.4 |
-1.40 |
-0.45 |
13.0 |
85 |
4 |
5 |
7 |
2 |
3 |
1 |
1 |
|
|
8 |
 |
1.55 |
1.54 |
68.1 |
-1.35 |
-0.43 |
13.4 |
84 |
5 |
5 |
8 |
1 |
4 |
1 |
1 |
|
|
9 |
 |
1.53 |
2.35 |
85.4 |
-1.88 |
-0.56 |
15.2 |
85 |
3 |
2 |
8 |
3 |
2 |
0 |
0 |
|
|
10 |
 |
1.56 |
1.55 |
96.2 |
-1.28 |
-0.30 |
14.2 |
86 |
6 |
1 |
6 |
3 |
2 |
0 |
0 |
|
 |
11 |
 |
1.80 |
1.81 |
134.4 |
0.35 |
0.18 |
9.5 |
83 |
3 |
4 |
6 |
19 |
4 |
1 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program