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PDBsum entry 9ebo

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 9ebo calculated with MOLE 2.0 PDB id
9ebo
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.73 2.78 25.7 -1.87 -0.69 9.4 81 2 1 6 2 1 0 0  
2 2.03 3.30 27.4 -0.86 -0.29 11.8 83 4 1 5 4 0 0 0  
3 2.03 3.31 28.8 -0.83 -0.40 8.0 85 3 1 4 3 1 0 0  
4 3.83 4.10 36.1 -1.73 -0.23 21.8 79 6 1 4 2 3 0 0  
5 2.79 3.04 38.5 -1.33 -0.11 18.5 77 5 2 2 4 3 0 1  
6 3.03 3.12 79.5 -1.96 -0.39 21.5 81 8 5 6 3 3 1 0  
7 2.79 3.04 84.0 -1.73 -0.30 19.5 79 7 6 4 5 3 1 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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