PDBsum entry 9ebi Go to PDB code:  Tunnel analysis for: 9ebi calculated with MOLE 2.0 PDB id 9ebi Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 1.53 28.7 -0.70 -0.49 11.6 87 2 1 5 4 1 1 2   2 1.17 2.95 30.4 -1.50 -0.23 18.8 84 4 2 3 4 3 0 0   3 1.34 1.53 31.0 -0.81 -0.49 11.6 85 3 1 5 3 1 2 2   4 1.70 2.63 23.7 1.37 0.67 3.4 77 1 0 3 8 3 0 0  Q8L 401 R 5 1.70 2.64 24.7 1.91 0.80 2.8 81 1 0 3 9 2 0 0  Q8L 401 R 6 1.26 1.60 15.9 0.76 0.40 1.5 77 0 0 3 7 2 0 0   7 1.15 1.15 15.7 0.49 -0.17 4.6 85 1 0 1 4 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.