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PDBsum entry 9ebh

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 9ebh calculated with MOLE 2.0 PDB id
9ebh
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 1.56 16.7 0.05 -0.02 18.8 81 2 2 1 5 0 0 0  
2 1.63 1.63 28.6 -1.00 -0.41 18.2 85 4 2 1 4 0 0 0  
3 1.64 1.64 29.7 -1.50 -0.48 21.8 82 4 2 2 4 0 0 0  
4 1.29 2.00 20.2 1.18 0.90 2.8 68 1 1 1 5 4 0 1  
5 1.29 1.52 20.8 0.36 -0.34 2.4 109 0 0 3 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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