PDBsum entry 9d7c Go to PDB code:  Tunnel analysis for: 9d7c calculated with MOLE 2.0 PDB id 9d7c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 1.90 23.6 -0.17 -0.03 11.8 82 1 2 1 4 2 0 0   2 1.63 3.29 18.6 -2.28 -0.62 6.9 89 1 1 6 2 1 0 0   3 1.67 3.63 18.9 -1.79 -0.49 5.5 89 1 1 5 3 1 0 0   4 1.84 2.62 21.1 -1.69 -0.58 15.4 80 1 2 3 1 1 1 0   5 1.66 3.69 24.8 -1.49 -0.47 5.4 90 1 1 5 3 1 0 0   6 1.46 2.52 17.2 1.37 0.55 5.0 74 1 0 2 4 3 0 0  Y33 301 B 7 1.19 2.47 21.6 0.91 0.56 4.1 69 1 0 2 4 5 0 0  Y33 301 B 8 1.40 1.76 24.1 0.45 0.49 7.5 71 2 0 3 4 5 0 0  Y33 301 C CO2 302 C 9 1.27 2.59 29.0 0.23 0.34 5.1 73 2 0 4 4 6 0 0  Y33 301 C CO2 302 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.