PDBsum entry 9d6c Go to PDB code:  Pore analysis for: 9d6c calculated with MOLE 2.0 PDB id 9d6c Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   40 pores, coloured by radius 39 pores, coloured by radius 39 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.94 2.10 42.3 -1.47 -0.58 8.9 88 3 3 5 5 0 2 0  QNG 301 H 2 1.29 1.66 44.5 -1.53 -0.39 12.5 85 4 2 2 2 0 1 0   3 1.35 1.71 48.7 -1.56 -0.34 17.8 88 6 2 4 5 0 2 0  QNG 301 H 4 1.44 1.62 57.9 -1.76 -0.43 13.7 86 4 2 2 2 0 2 0   5 1.26 1.68 78.6 -1.38 -0.26 13.0 82 7 2 5 8 0 9 0   6 1.89 2.76 80.2 -1.86 -0.57 18.8 84 5 6 9 4 2 3 0   7 2.12 2.45 96.7 -1.28 -0.28 9.2 82 5 3 7 7 0 9 0   8 1.54 1.74 102.6 -2.24 -0.60 21.0 79 8 7 9 5 2 4 0   9 1.97 2.11 131.0 -1.72 -0.49 20.5 84 7 9 10 8 2 3 0  QNG 301 G 10 1.68 1.83 141.5 -1.79 -0.42 8.7 78 7 2 11 3 0 15 0   11 1.51 1.66 145.7 -2.13 -0.57 20.2 85 11 9 13 6 1 4 0  QNG 301 G 12 1.44 2.51 154.0 -2.51 -0.66 26.3 81 12 13 10 4 1 7 0   13 1.45 1.61 149.9 -1.97 -0.52 22.2 82 13 12 11 7 3 4 0   14 1.43 1.86 155.9 -2.02 -0.57 21.3 85 16 11 16 8 1 6 0   15 1.39 1.41 155.8 -2.14 -0.49 25.5 81 7 10 10 7 2 4 0   16 1.59 1.75 166.1 -2.67 -0.57 32.5 81 17 13 8 6 2 4 0  IHP 401 M 17 1.33 1.67 165.4 -1.67 -0.38 10.4 79 10 5 11 4 0 19 0   18 1.41 2.67 169.3 -2.40 -0.64 25.5 82 14 15 10 5 1 7 0   19 2.01 2.26 165.5 -1.49 -0.34 9.4 80 8 5 12 8 0 18 0   20 1.39 1.42 167.1 -2.21 -0.59 22.7 86 11 8 13 7 0 4 0   21 1.89 1.95 181.4 -2.57 -0.56 31.2 82 19 15 8 6 2 4 0  IHP 401 M 22 1.59 1.73 183.0 -2.43 -0.64 26.5 83 16 16 10 6 1 6 0  IHP 401 M 23 1.41 1.82 193.9 -1.71 -0.38 15.5 83 13 8 15 14 1 11 0  QNG 301 K 24 1.59 2.13 203.9 -1.42 -0.32 13.7 84 12 8 16 17 1 10 0  QNG 301 K 25 1.48 1.49 215.2 -1.96 -0.55 21.1 85 18 15 17 11 3 6 0   26 1.73 1.87 220.1 -1.72 -0.41 9.4 78 11 6 16 5 0 24 0   27 1.00 0.99 235.0 -2.05 -0.50 23.4 84 17 14 15 10 2 5 0   28 1.73 1.87 229.5 -1.63 -0.38 11.7 81 14 8 19 12 0 19 0  QNG 301 B 29 1.50 1.64 260.0 -1.95 -0.52 14.9 86 14 13 22 14 2 9 0  QNG 302 D 30 1.27 1.37 317.2 -2.09 -0.52 23.4 85 19 19 17 16 1 7 0  IHP 401 M QNG 402 M 31 1.78 1.79 51.6 -1.69 -0.52 20.8 85 4 3 1 3 0 2 0   32 1.24 1.40 64.9 -1.80 -0.55 20.7 86 5 5 4 6 1 1 0   33 1.15 1.40 120.8 -2.10 -0.56 20.1 85 7 5 4 5 1 1 0   34 1.56 1.63 62.4 -1.03 -0.44 15.0 82 6 3 2 4 1 2 1   35 1.19 1.32 49.2 -1.73 -0.50 17.4 77 2 3 1 1 0 5 0   36 1.64 1.72 65.9 -1.83 -0.48 21.8 80 4 4 1 3 1 4 0   37 1.55 1.65 56.7 -1.15 -0.49 15.9 82 6 3 2 3 0 2 1   38 1.24 1.69 28.7 -0.74 -0.46 9.8 79 4 1 2 1 0 2 1   39 1.25 1.70 76.8 -2.24 -0.59 16.3 83 4 1 3 1 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.