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PDBsum entry 9cbm

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 9cbm calculated with MOLE 2.0 PDB id
9cbm
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.69 2.10 27.2 -1.81 -0.35 25.1 83 4 3 2 0 2 0 0  
2 1.69 2.07 43.7 -1.27 -0.41 18.8 80 6 3 1 3 2 0 0  
3 1.33 1.44 85.2 -1.41 -0.51 18.1 86 9 3 6 5 2 1 1  
4 1.20 1.38 88.9 -1.35 -0.51 15.1 80 3 4 4 3 3 2 0  
5 1.09 1.12 129.6 -1.10 -0.50 17.1 86 10 6 2 7 1 0 0  
6 1.18 1.28 145.2 -1.18 -0.53 17.2 88 8 6 2 6 1 0 0  
7 1.17 1.17 149.2 -1.69 -0.33 26.7 80 12 7 0 6 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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