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PDBsum entry 9ca0

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Top Page protein dna_rna metals Protein-protein interface(s) pores links
Pore analysis for: 9ca0 calculated with MOLE 2.0 PDB id
9ca0
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.04 2.07 164.4 -1.43 -0.42 21.5 85 9 10 6 6 2 2 1  PTR 336 A MN 701 A DA 4 D DA 5 E
2 1.28 1.41 171.6 -1.38 -0.40 20.7 85 9 10 6 9 2 2 1  PTR 336 A MN 701 A DA 4 D DA 5 E

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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