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PDBsum entry 9c6c

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 9c6c calculated with MOLE 2.0 PDB id
9c6c
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.19 2.61 17.6 0.36 0.01 13.8 89 0 2 3 6 0 0 1  
2 1.19 2.61 20.3 0.62 0.12 11.2 82 0 3 2 7 1 0 1  
3 1.36 2.22 19.1 0.26 -0.02 11.7 85 0 2 3 6 0 0 1  
4 1.20 2.52 21.4 0.60 0.14 12.0 81 0 2 2 6 1 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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