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PDBsum entry 9c5h

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 9c5h calculated with MOLE 2.0 PDB id
9c5h
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.13 1.13 45.6 0.79 -0.13 2.7 91 1 1 2 9 0 0 0  EDO 303 A
2 1.13 1.13 45.9 0.84 -0.11 2.7 91 1 1 2 9 0 0 0  EDO 303 A
3 1.12 1.13 48.2 0.41 -0.21 4.3 87 4 1 2 8 0 0 0  EDO 302 B
4 1.13 1.14 48.3 0.39 -0.21 4.5 87 4 1 2 8 0 0 0  EDO 302 B
5 1.97 4.81 26.3 0.12 0.27 10.5 81 4 1 4 4 2 0 0  NDP 305 C MLI 306 C
6 1.64 1.66 15.8 2.16 0.46 2.3 91 0 1 2 6 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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