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PDBsum entry 9c0k

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 9c0k calculated with MOLE 2.0 PDB id
9c0k
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.46 3.64 26.2 -1.86 -0.28 23.1 77 6 1 3 1 2 0 1  
2 2.74 4.24 31.1 -2.21 -0.60 16.7 85 3 2 6 3 1 0 0  
3 1.21 1.41 32.0 -1.30 -0.37 23.7 73 2 3 2 3 1 1 0  
4 1.23 1.59 52.9 -1.04 -0.40 14.5 85 4 5 3 3 2 1 0  
5 1.58 2.05 59.2 -1.70 -0.32 23.9 83 5 3 2 4 1 0 0  
6 1.21 1.41 59.5 -1.56 -0.47 21.1 78 3 4 3 5 1 1 0  
7 1.25 1.61 96.9 -1.96 -0.66 15.2 87 7 5 11 3 2 1 0  
8 1.37 2.38 26.2 -0.46 0.01 11.1 84 3 1 4 4 2 0 1  
9 1.43 1.45 27.3 -0.38 0.52 8.9 68 1 1 1 4 5 2 0  
10 1.14 1.29 31.5 -0.64 -0.02 7.4 79 1 2 4 3 3 0 1  
11 1.32 3.94 33.1 -1.14 -0.40 20.0 89 4 4 5 4 0 0 1  
12 1.34 4.00 35.5 -0.98 -0.38 19.8 89 5 4 5 3 0 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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