PDBsum entry 9buf Go to PDB code:  Tunnel analysis for: 9buf calculated with MOLE 2.0 PDB id 9buf Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.50 1.60 23.5 0.04 -0.22 6.0 87 0 3 1 4 0 2 0   2 1.59 1.96 23.9 0.07 -0.18 6.4 84 0 3 1 4 0 3 0   3 1.54 1.77 24.7 -0.73 -0.09 16.1 84 0 3 1 7 1 2 0   4 1.48 1.59 25.0 -0.49 -0.01 12.6 87 0 3 2 7 1 2 0   5 1.50 1.60 30.3 -0.13 -0.23 5.8 88 0 3 2 4 0 2 0   6 1.59 1.96 30.6 -0.18 -0.21 5.8 86 0 3 2 4 0 3 0   7 1.50 1.60 31.5 -0.52 -0.18 12.6 85 0 5 1 9 1 2 0   8 1.59 1.94 31.6 -0.28 -0.07 9.8 86 0 5 2 9 1 3 0   9 1.20 1.20 15.2 -1.50 -0.36 21.8 83 2 1 0 2 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.