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PDBsum entry 9bue

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 9bue calculated with MOLE 2.0 PDB id
9bue
Pores calculated on whole structure Pores calculated excluding ligands

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15 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.15 3.66 26.1 -2.65 -0.69 26.3 85 4 3 4 0 1 0 0  
2 1.40 1.47 30.1 -0.98 -0.04 19.5 82 4 1 1 2 1 0 0  
3 1.18 1.51 31.4 0.33 0.11 14.3 79 3 2 1 6 0 1 1  
4 2.61 3.04 34.1 -1.29 -0.45 17.9 78 4 2 0 1 1 2 0  
5 1.30 1.45 40.2 -0.24 -0.26 13.4 89 3 1 3 7 0 0 0  
6 1.75 1.75 42.1 -1.90 -0.60 22.4 75 4 4 1 0 2 2 0  
7 1.18 1.52 48.0 -0.74 -0.05 19.2 81 4 3 2 7 1 2 1  
8 1.29 1.48 57.0 -1.35 -0.11 24.7 77 7 4 2 2 2 3 0  
9 2.04 2.04 81.0 -0.77 -0.26 14.2 85 3 3 3 5 1 1 0  
10 2.81 2.93 82.4 -1.97 -0.66 14.6 81 5 3 7 2 2 0 0  
11 1.45 3.39 85.1 -0.52 -0.14 15.6 87 6 2 4 6 1 0 0  
12 1.17 1.51 103.6 -0.72 -0.18 17.9 84 6 6 4 10 0 2 1  
13 1.47 1.71 111.0 -1.94 -0.49 24.4 82 13 7 6 4 3 0 2  
14 1.54 1.89 148.2 -1.79 -0.60 18.4 84 13 7 13 6 3 0 2  
15 1.20 2.68 190.2 -0.64 -0.06 12.9 78 10 8 6 16 9 5 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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