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PDBsum entry 9blb

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 9blb calculated with MOLE 2.0 PDB id
9blb
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.24 3.38 28.7 -1.98 -0.53 21.5 82 4 3 3 0 2 0 0  
2 1.77 3.35 30.6 -1.95 -0.82 9.1 85 1 1 5 1 0 0 0  
3 2.37 2.46 31.1 -1.90 -0.46 15.8 84 4 0 4 1 2 0 0  
4 1.60 3.17 33.7 -1.31 -0.53 20.0 91 4 2 4 4 0 0 1  
5 2.06 4.39 47.9 -1.34 -0.53 16.1 82 5 3 5 4 2 2 2  
6 1.29 1.82 87.2 -2.16 -0.48 21.6 83 10 2 7 3 0 1 1  
7 2.49 2.80 93.9 -1.75 -0.37 23.1 85 10 5 6 4 3 1 0  
8 1.24 1.75 112.3 -1.73 -0.40 20.0 86 10 6 8 9 1 1 0  
9 1.41 1.84 132.1 -1.81 -0.33 21.4 88 14 5 12 7 2 1 0  
10 1.99 3.32 28.9 -2.41 -0.39 31.4 79 7 2 2 0 1 2 0  
11 1.24 1.82 58.8 -1.03 -0.01 21.2 83 10 2 2 9 1 0 0  
12 1.38 1.46 93.1 -0.15 0.09 7.2 82 3 2 5 8 4 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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