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PDBsum entry 9bdh
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Tunnel analysis for: 9bdh calculated with  MOLE 2.0
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PDB id
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9bdh
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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9 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.44 |
1.44 |
15.5 |
-2.03 |
-0.50 |
24.1 |
79 |
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3 |
1 |
0 |
1 |
0 |
2 |
0 |
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2 |
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1.34 |
1.52 |
17.9 |
-0.94 |
-0.52 |
8.7 |
86 |
2 |
1 |
2 |
1 |
0 |
1 |
0 |
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3 |
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1.45 |
1.46 |
23.9 |
-1.59 |
-0.53 |
17.7 |
82 |
2 |
2 |
0 |
2 |
0 |
3 |
0 |
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4 |
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1.44 |
1.44 |
27.1 |
-1.53 |
-0.62 |
15.5 |
81 |
2 |
2 |
0 |
1 |
0 |
3 |
0 |
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5 |
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1.44 |
1.44 |
32.9 |
-1.78 |
-0.38 |
24.3 |
85 |
3 |
2 |
2 |
2 |
1 |
3 |
0 |
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6 |
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1.13 |
1.13 |
24.7 |
0.15 |
-0.25 |
4.5 |
77 |
2 |
1 |
4 |
4 |
2 |
1 |
1 |
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7 |
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1.30 |
1.77 |
26.8 |
1.17 |
0.83 |
3.1 |
74 |
1 |
0 |
2 |
6 |
7 |
0 |
0 |
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8 |
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1.58 |
1.76 |
16.8 |
-0.74 |
-0.68 |
2.5 |
98 |
0 |
0 |
5 |
1 |
1 |
0 |
0 |
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9 |
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1.14 |
2.23 |
15.6 |
-0.48 |
0.14 |
13.1 |
80 |
3 |
0 |
1 |
4 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program