PDBsum entry 9bd7 Go to PDB code:  Tunnel analysis for: 9bd7 calculated with MOLE 2.0 PDB id 9bd7 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 1.42 25.0 -0.52 -0.09 19.9 75 3 3 0 6 3 0 0   2 1.13 2.58 18.1 0.72 0.47 8.0 76 0 2 1 7 1 0 0   3 1.08 2.64 18.1 0.53 0.40 8.1 76 0 2 1 7 1 0 0   4 1.23 1.24 15.8 0.99 0.32 5.6 71 1 0 0 5 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.