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PDBsum entry 9ar5
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Pore analysis for: 9ar5 calculated with  MOLE 2.0
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PDB id
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9ar5
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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8 pores,
coloured by radius |
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13 pores,
coloured by radius
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13 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.45 |
1.45 |
25.5 |
-0.32 |
-0.45 |
9.7 |
93 |
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2 |
1 |
1 |
2 |
0 |
0 |
0 |
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C 11 B A 12 B DT 23 X DG 24 X DC 25 X
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2 |
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2.64 |
3.05 |
25.6 |
-0.57 |
-0.37 |
10.4 |
98 |
1 |
0 |
3 |
3 |
0 |
1 |
0 |
DA 36 D DA 37 D DG 2 X DC 3 X
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3 |
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1.46 |
1.46 |
29.3 |
-0.34 |
-0.48 |
8.5 |
100 |
4 |
0 |
4 |
2 |
0 |
0 |
0 |
DT 23 X DG 24 X DC 25 X
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4 |
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3.01 |
3.20 |
37.5 |
-0.82 |
-0.60 |
12.0 |
96 |
5 |
2 |
5 |
2 |
0 |
0 |
0 |
C 11 B A 12 B DG 24 X DC 25 X
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5 |
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1.30 |
1.30 |
48.5 |
-1.44 |
-0.27 |
18.1 |
71 |
3 |
3 |
1 |
5 |
3 |
2 |
0 |
G 10 B C 11 B A 12 B
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6 |
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1.55 |
1.55 |
63.7 |
-1.42 |
-0.62 |
18.3 |
82 |
6 |
1 |
0 |
2 |
0 |
0 |
0 |
U 24 B G 25 B C 26 B U 27 B G 28 B G 29 B G 30 B
G 31 B G 43 B C 44 B C 47 B C 48 B U 49 B A 50 B
G 51 B C 52 B G 55 B A 56 B G 64 B G 66 B G 67 B
G 68 B
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7 |
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2.04 |
2.03 |
96.7 |
-0.95 |
-0.55 |
15.8 |
82 |
5 |
4 |
0 |
4 |
0 |
0 |
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C 11 B A 12 B A 13 B G 14 B A 15 B U 16 B C 18 B
G 21 B U 22 B A 23 B U 24 B G 25 B C 26 B U 27 B
G 28 B G 29 B G 30 B G 31 B G 43 B C 44 B C 47 B
C 48 B U 49 B C 52 B DT 12 X DA 13 X DC 14 X DC
15 X DC 25 X
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8 |
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1.65 |
1.67 |
98.6 |
-1.24 |
-0.54 |
20.2 |
85 |
5 |
6 |
2 |
6 |
0 |
1 |
0 |
U 22 B A 23 B U 24 B G 25 B C 26 B U 27 B G 28 B
G 29 B G 30 B G 31 B G 43 B C 44 B C 47 B C 48 B
U 49 B C 52 B C 73 B DC 32 D DA 33 D 5MC 34 D DC
35 D DA 36 D DA 37 D DG 9 X DT 10 X DA 11 X DT 12
X
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9 |
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1.60 |
1.60 |
104.8 |
-1.46 |
-0.54 |
22.4 |
83 |
7 |
7 |
2 |
7 |
0 |
1 |
0 |
U 22 B A 23 B A 50 B G 51 B C 52 B G 55 B A 56 B
G 64 B G 66 B G 67 B G 68 B C 73 B DC 32 D DA 33
D 5MC 34 D DC 35 D DA 36 D DA 37 D DG 9 X DT 10 X
DA 11 X DT 12 X
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10 |
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1.66 |
1.68 |
105.8 |
-1.35 |
-0.67 |
19.3 |
87 |
4 |
10 |
4 |
5 |
0 |
1 |
0 |
C 11 B A 12 B A 13 B G 14 B A 15 B U 16 B DC 32 D
DA 33 D 5MC 34 D DC 35 D DA 36 D DA 37 D DG 9 X
DT 10 X DA 11 X DT 12 X DA 13 X DC 14 X DC 15 X
DC 25 X
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11 |
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1.22 |
1.33 |
142.3 |
-1.41 |
-0.47 |
22.2 |
82 |
11 |
8 |
1 |
12 |
3 |
10 |
0 |
U 22 B A 23 B U 24 B G 25 B C 26 B U 27 B G 28 B
G 29 B G 30 B G 31 B G 43 B C 44 B C 47 B C 48 B
U 49 B C 52 B C 73 B DC 32 D DA 11 X DT 12 X
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12 |
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1.75 |
1.77 |
254.4 |
-2.13 |
-0.57 |
26.6 |
87 |
22 |
16 |
15 |
8 |
1 |
1 |
1 |
DT 30 D DA 31 D DC 32 D DA 33 D 5MC 34 D DC 35 D
DA 36 D DA 37 D DG 9 X DT 10 X
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13 |
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1.58 |
1.62 |
270.1 |
-1.74 |
-0.55 |
22.5 |
85 |
19 |
13 |
12 |
11 |
1 |
0 |
1 |
A 12 B A 13 B G 14 B A 15 B U 16 B C 18 B G 21 B
U 22 B A 23 B A 50 B G 51 B C 52 B G 55 B A 56 B
G 64 B G 66 B G 67 B G 68 B DT 12 X DA 13 X DC 14
X DC 15 X DG 24 X
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program