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PDBsum entry 8zsp

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8zsp calculated with MOLE 2.0 PDB id
8zsp
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.63 1.76 29.7 -0.75 -0.08 13.8 70 2 2 1 1 3 1 2  
2 1.61 3.96 38.0 -0.76 -0.13 10.9 86 3 0 2 5 2 0 0  
3 1.87 1.87 45.3 -0.77 -0.57 9.8 95 4 0 7 4 0 0 0  
4 1.56 1.78 56.2 -1.36 -0.48 17.8 84 6 3 5 4 2 1 2  
5 1.54 3.30 66.6 -2.03 -0.63 21.3 89 6 5 10 3 2 0 1  
6 1.64 3.60 97.2 -1.72 -0.54 19.5 86 10 6 9 5 2 0 1  
7 1.62 3.96 112.0 -1.86 -0.58 18.8 85 9 5 9 5 3 0 1  
8 1.62 3.96 117.6 -1.63 -0.51 18.2 84 10 5 9 5 2 1 2  
9 1.36 2.71 177.2 -0.03 0.17 10.2 81 8 4 8 22 9 2 1  
10 1.39 3.34 201.9 -0.23 0.10 12.9 82 13 4 11 22 9 3 0  7LD 401 R
11 1.39 3.34 217.0 -0.12 0.04 10.1 86 9 4 16 24 8 2 0  7LD 401 R

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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