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PDBsum entry 8zps

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 8zps calculated with MOLE 2.0 PDB id
8zps
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.08 1.26 26.6 1.59 0.40 3.8 77 1 0 0 5 2 1 0  
2 1.94 1.94 29.5 -1.11 -0.16 12.4 84 2 2 3 2 4 0 0  
3 1.36 1.36 34.1 -0.61 0.05 15.0 73 3 3 1 4 4 1 0  
4 1.33 1.51 41.2 1.95 0.75 4.5 80 2 0 1 8 2 0 1  
5 3.06 3.65 50.7 -2.15 -0.34 27.9 81 9 4 5 1 3 0 0  
6 1.43 1.59 51.8 -0.96 -0.20 13.1 87 5 2 6 5 4 0 0  
7 1.24 1.75 54.3 2.41 0.95 0.9 78 0 0 1 12 4 0 0  
8 1.68 3.75 55.4 -1.47 -0.48 15.2 87 6 2 8 2 2 1 2  
9 1.82 1.88 57.3 -2.05 -0.30 23.6 81 9 5 4 2 4 0 0  
10 1.25 2.06 73.5 0.24 0.45 13.8 75 2 3 0 8 6 0 1  
11 1.65 3.68 78.4 -1.81 -0.58 20.2 87 7 7 9 3 2 1 2  
12 2.28 2.62 90.2 -2.90 -0.69 36.2 90 7 10 5 2 0 0 0  
13 1.87 3.11 91.0 -1.51 -0.49 19.8 86 7 6 8 3 2 1 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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