PDBsum entry 8zjd Go to PDB code:  Pore analysis for: 8zjd calculated with MOLE 2.0 PDB id 8zjd Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.49 28.6 0.38 0.27 12.0 72 2 2 2 6 2 1 0   2 1.48 1.48 89.6 -1.48 -0.41 16.5 86 9 5 9 7 3 2 0   3 2.43 3.55 93.3 -1.51 -0.40 18.2 79 10 5 9 4 4 4 3   4 1.29 1.30 111.5 -1.10 -0.48 16.4 87 6 5 6 5 2 1 3   5 1.33 1.32 115.1 -1.45 -0.49 16.2 83 5 5 7 5 2 3 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.