PDBsum entry 8zbe

Pore analysis for: 8zbe calculated with

MOLE 2.0

PDB id

8zbe

Pores calculated on whole structure

Pores calculated excluding ligands

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9 pores, coloured by radius

9 pores, coloured by radius

9 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.51

1.70

25.2

1.24

0.39

6.3

79

0

2

1

7

2

1

0

2

1.32

1.32

33.6

0.45

-0.01

3.6

77

0

2

1

8

2

1

2

3

1.33

1.33

36.9

0.48

0.15

5.4

76

0

3

2

9

3

1

1

4

1.71

3.58

59.8

-1.95

-0.58

23.8

86

6

6

6

3

2

1

0

5

1.82

1.85

89.5

-1.26

-0.42

16.2

86

9

6

7

7

2

2

0

6

1.80

1.95

92.3

-1.07

-0.31

16.6

84

10

4

6

7

4

2

0

7

1.50

1.70

108.0

-0.44

-0.06

10.7

80

3

3

7

7

7

1

0

8

1.68

1.83

141.5

-1.47

-0.52

17.0

86

10

9

14

5

6

1

0

9

1.23

1.24

145.8

-0.93

-0.29

15.0

84

11

7

11

13

4

3

2

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.