PDBsum entry 8zbe Go to PDB code:  Tunnel analysis for: 8zbe calculated with MOLE 2.0 PDB id 8zbe Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.41 1.55 31.7 1.29 0.42 6.6 77 2 0 1 9 4 0 0   2 1.42 1.74 38.9 -0.96 -0.32 9.4 88 1 4 6 6 3 0 0   3 1.42 1.57 48.3 -0.56 -0.15 11.6 83 4 1 4 7 3 1 0   4 1.25 1.44 51.0 0.14 0.06 6.3 82 1 1 5 12 3 1 0   5 1.43 1.57 54.3 -0.95 -0.41 14.3 88 5 6 6 8 2 0 0   6 1.43 1.73 56.7 -1.00 -0.32 13.6 87 4 2 6 7 2 1 0   7 1.40 1.55 57.1 -0.46 -0.19 8.8 86 4 1 6 9 3 1 0   8 1.27 1.35 60.6 -0.34 0.05 7.6 79 2 1 8 10 7 1 0   9 1.27 1.35 62.2 0.06 0.17 6.8 77 2 1 7 12 7 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.