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PDBsum entry 8z7j

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 8z7j calculated with MOLE 2.0 PDB id
8z7j
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.12 1.77 26.0 -1.06 -0.30 14.6 93 3 1 4 3 1 0 0  
2 2.06 2.08 35.6 -0.98 -0.30 20.7 84 8 2 3 5 1 0 0  
3 2.03 2.05 87.3 -1.43 -0.40 20.5 79 10 5 7 4 4 1 4  
4 2.66 2.79 88.3 -1.98 -0.43 26.4 82 10 6 4 4 1 1 1  
5 2.06 2.07 94.9 -2.07 -0.53 26.2 84 12 8 3 5 0 1 1  
6 1.95 1.98 133.5 -1.77 -0.43 22.3 80 12 8 7 4 3 2 5  
7 1.32 1.88 40.8 -0.27 -0.05 11.2 83 1 4 4 5 3 1 0  
8 1.22 2.96 86.8 -1.01 -0.49 12.0 84 2 4 4 2 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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