PDBsum entry 8yyw Go to PDB code:  Tunnel analysis for: 8yyw calculated with MOLE 2.0 PDB id 8yyw Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 1.88 30.9 0.98 0.46 5.8 87 2 0 2 10 2 0 0   2 1.39 1.43 24.2 0.84 0.52 1.9 71 1 0 2 7 5 0 1   3 1.17 1.33 15.3 -0.88 -0.32 21.3 82 2 2 1 2 0 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.