PDBsum entry 8ymw Go to PDB code:  Pore analysis for: 8ymw calculated with MOLE 2.0 PDB id 8ymw Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.12 1.12 42.1 -1.46 -0.50 18.8 91 4 2 4 3 0 1 0   2 1.12 1.12 42.2 -1.46 -0.51 18.8 91 4 2 4 3 0 1 0   3 1.64 2.15 60.4 -2.15 -0.51 25.8 85 6 2 2 4 0 1 0   4 1.29 1.30 63.8 -1.47 -0.08 20.1 73 9 5 1 3 8 0 0   5 1.23 1.25 69.7 -1.84 -0.12 21.3 79 9 4 4 3 7 0 0   6 1.22 1.23 72.4 -1.58 -0.07 21.1 76 10 6 1 4 7 0 0   7 1.22 1.23 72.4 -1.58 -0.07 21.3 76 10 6 1 4 7 0 0   8 1.38 1.44 74.5 -1.10 0.03 10.2 75 6 6 5 6 12 0 0   9 1.38 1.44 77.2 -0.95 0.05 11.2 72 7 8 2 7 12 0 0   10 1.14 1.14 118.7 -2.33 -0.58 28.8 89 9 5 6 6 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.