PDBsum entry 8yjp Go to PDB code:  Pore analysis for: 8yjp calculated with MOLE 2.0 PDB id 8yjp Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.84 1.84 29.6 0.81 0.12 2.2 55 0 0 0 8 2 0 1  CLR 405 A 2 1.90 1.88 55.7 0.72 0.40 7.4 68 5 0 0 12 6 0 1  MW9 402 A CLR 405 A MW9 404 B 3 1.93 1.94 102.7 1.42 0.53 4.5 69 3 0 0 16 8 0 1  MW9 401 A MW9 402 A CLR 403 A CLR 404 A CLR 405 A CLR 402 B MW9 404 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.