PDBsum entry 8yh3 Go to PDB code:  Pore analysis for: 8yh3 calculated with MOLE 2.0 PDB id 8yh3 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.54 1.82 27.0 -1.94 -0.44 18.9 86 2 1 5 0 2 0 0   2 3.41 4.87 28.2 -1.11 -0.42 17.8 83 5 3 4 1 2 0 0   3 2.39 4.07 34.7 -1.12 -0.46 12.0 82 5 0 5 4 2 1 0   4 2.37 4.05 35.8 -1.39 -0.45 16.3 78 5 3 5 1 3 1 0   5 2.44 2.44 50.3 -1.07 -0.33 20.1 82 3 3 4 4 1 0 0   6 1.75 1.75 54.0 -1.25 -0.36 17.8 80 5 4 4 2 2 1 3   7 1.54 1.82 96.4 -1.36 -0.40 15.4 84 4 2 8 4 3 1 0   8 1.41 1.64 35.8 0.86 0.37 4.9 84 2 0 5 8 3 0 1  6MD 801 R Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.