PDBsum entry 8yh2 Go to PDB code:  Tunnel analysis for: 8yh2 calculated with MOLE 2.0 PDB id 8yh2 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.19 1.25 31.3 -0.20 -0.30 11.2 78 2 1 2 4 0 2 3   2 1.19 1.24 39.5 -0.64 -0.27 13.5 82 6 1 3 6 2 0 2   3 1.09 2.81 34.8 0.53 0.31 6.7 85 3 0 6 9 2 0 0  ADN 801 R 4 1.44 2.28 16.4 -0.42 -0.14 20.5 88 1 3 2 3 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.