PDBsum entry 8y02 Go to PDB code:  Pore analysis for: 8y02 calculated with MOLE 2.0 PDB id 8y02 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.57 31.3 -1.16 -0.26 11.0 84 3 2 4 2 4 0 0   2 3.50 3.96 31.7 -1.99 -0.59 17.4 82 3 3 6 2 2 1 0   3 2.05 2.05 37.2 -1.93 -0.62 23.7 86 6 4 4 4 0 0 0   4 1.65 1.69 38.2 -1.27 -0.33 18.0 87 3 3 4 5 1 0 0   5 1.65 1.70 38.9 -0.55 -0.30 14.9 86 6 1 2 5 1 0 0   6 2.05 2.05 39.3 -0.83 -0.36 12.2 80 5 2 3 4 2 1 0   7 1.65 1.72 45.0 -0.42 -0.17 8.9 83 2 1 5 5 3 1 0   8 2.02 2.11 54.4 -2.05 -0.67 23.7 83 5 4 4 2 0 0 0   9 1.21 1.23 57.0 -1.10 -0.43 15.8 81 7 3 5 3 3 1 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.