 |
PDBsum entry 8xx3
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Signaling protein/immune system
|
PDB id
|
|
|
|
8xx3
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Contents |
 |
|
|
|
|
|
|
|
|
|
53 a.a.
|
 |
|
|
|
|
|
|
|
67 a.a.
|
 |
|
|
|
|
|
|
|
298 a.a.
|
 |
|
|
|
|
|
|
|
215 a.a.
|
 |
|
|
|
|
|
|
|
336 a.a.
|
 |
|
|
|
|
|
|
|
53 a.a.
|
 |
|
|
|
|
|
|
|
233 a.a.
|
 |
|
|
|
|
|
|
|
Generate full PROCHECK analyses
|
PROCHECK summary for 8xx3
Ramachandran plot
PROCHECK statistics
1. Ramachandran Plot statistics
No. of
residues %-tage
------ ------
Most favoured regions [A,B,L] 1005 89.9%*
Additional allowed regions [a,b,l,p] 112 10.0%
Generously allowed regions [~a,~b,~l,~p] 1 0.1%
Disallowed regions [XX] 0 0.0%
---- ------
Non-glycine and non-proline residues 1118 100.0%
End-residues (excl. Gly and Pro) 17
Glycine residues 80
Proline residues 40
----
Total number of residues 1255
Based on an analysis of 118 structures of resolution of at least 2.0 Angstroms and R-factor no greater than 20.0 a good
quality model would be expected to have over 90% in the most favoured regions [A,B,L].
2. G-Factors
Average
Parameter Score Score
--------- ----- -----
Dihedral angles:-
Phi-psi distribution -0.11
Chi1-chi2 distribution -0.20
Chi1 only 0.08
Chi3 & chi4 0.52
Omega -0.01
-0.02
=====
Main-chain covalent forces:-
Main-chain bond lengths 0.67
Main-chain bond angles 0.48
0.56
=====
OVERALL AVERAGE 0.22
=====
G-factors provide a measure of how unusual, or out-of-the-ordinary, a property is.
Values below -0.5* - unusual
Values below -1.0** - highly unusual
Important note: The main-chain
bond-lengths and bond angles are compared with
the Engh & Huber (1991) ideal values derived
from small-molecule data. Therefore, structures
refined using different restraints may show
apparently large deviations from normality.
|
|
 |