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PDBsum entry 8xws

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 8xws calculated with MOLE 2.0 PDB id
8xws
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.13 2.23 33.5 -2.04 -0.36 25.0 82 5 6 3 4 3 1 0  
2 1.28 1.28 39.7 -1.13 -0.57 10.7 92 1 3 8 4 2 1 0  
3 1.66 2.29 39.8 -1.83 -0.30 24.3 78 5 6 2 7 3 2 0  
4 1.19 1.21 42.5 -1.20 -0.47 17.6 80 4 3 3 4 0 1 2  
5 1.22 1.22 45.3 -0.42 -0.29 14.2 80 4 3 2 6 0 1 2  
6 1.19 1.20 51.2 -1.32 -0.24 19.2 74 7 6 3 3 3 2 2  
7 1.26 1.26 54.7 -1.21 -0.25 15.4 79 4 6 7 6 5 3 0  
8 1.30 1.39 56.1 -1.62 -0.67 16.2 91 2 4 7 4 0 2 0  
9 1.29 1.50 58.8 -0.78 -0.49 12.6 91 2 4 7 6 0 2 0  
10 1.30 1.37 64.8 -1.67 -0.39 18.3 81 5 7 7 3 3 3 0  
11 1.28 1.43 96.6 -1.11 -0.53 15.1 84 3 8 6 7 0 2 1  
12 1.36 1.52 111.7 -1.12 -0.32 17.0 77 6 11 6 9 3 4 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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