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PDBsum entry 8xvi

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 8xvi calculated with MOLE 2.0 PDB id
8xvi
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.45 2.68 59.2 -1.87 -0.55 20.5 84 7 3 5 1 1 0 1  
2 1.67 1.66 61.1 -0.70 -0.33 11.5 85 5 2 6 10 0 0 0  
3 1.23 1.29 79.6 -0.40 -0.22 11.6 85 8 2 4 12 0 0 0  
4 2.34 2.52 91.9 -1.90 -0.37 23.9 84 10 6 10 3 2 0 2  
5 2.04 2.03 104.3 -1.49 -0.35 20.6 83 9 5 9 5 4 1 3  
6 1.99 1.95 105.9 -1.35 -0.34 19.3 82 9 5 9 6 5 1 3  
7 1.15 3.43 161.9 0.42 0.42 7.0 75 8 0 7 22 10 4 1  
8 1.15 3.45 167.6 0.06 0.29 9.1 77 8 2 11 21 9 3 2  
9 1.30 1.58 251.1 -0.76 -0.12 13.3 83 17 8 23 30 8 1 2  
10 1.86 1.96 258.1 -1.15 -0.41 15.0 85 17 7 17 14 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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