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PDBsum entry 8xqt

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8xqt calculated with MOLE 2.0 PDB id
8xqt
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.16 2.84 35.2 -1.16 -0.50 22.7 81 4 4 1 4 1 0 0  
2 1.35 1.78 44.9 -1.89 -0.56 23.0 81 4 4 3 2 2 0 0  
3 1.16 2.18 64.7 0.68 0.29 6.0 82 1 2 6 7 8 1 0  CLR 501 R
4 1.78 2.07 71.5 -2.00 -0.34 15.4 85 4 2 7 0 4 1 0  
5 1.71 1.70 80.5 1.05 0.62 7.4 78 3 2 4 13 11 1 0  CLR 501 R CLR 502 R
6 1.69 1.73 86.6 1.45 0.70 4.0 79 0 2 4 13 11 1 0  CLR 501 R CLR 502 R
7 1.70 1.85 90.5 -1.54 -0.43 19.0 81 11 5 6 4 3 2 3  
8 2.32 2.31 95.6 -1.96 -0.70 20.3 91 5 3 3 2 0 0 0  
9 1.20 1.19 100.7 -1.39 -0.45 16.4 79 8 5 9 4 6 1 4  
10 1.25 1.25 100.6 -1.44 -0.43 16.9 81 10 4 9 5 5 2 3  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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