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PDBsum entry 8xql

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8xql calculated with MOLE 2.0 PDB id
8xql
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.42 3.14 38.3 -2.13 -0.52 17.8 82 7 2 5 3 1 0 0  
2 1.21 1.61 40.0 1.09 0.49 2.6 82 0 1 4 4 8 0 0  CLR 503 R
3 2.43 2.43 45.5 -2.04 -0.34 28.7 83 8 4 2 2 2 0 0  
4 1.89 3.21 51.9 -2.09 -0.14 22.5 79 6 0 2 3 1 0 1  
5 3.20 3.86 59.4 -1.84 0.02 26.8 79 8 3 1 3 3 0 1  
6 1.20 1.61 65.6 0.34 0.36 10.0 81 5 3 4 12 7 0 0  GOQ 501 R GOQ 502 R
7 1.57 3.07 66.7 -1.69 -0.59 14.1 85 4 5 6 3 2 0 0  
8 1.59 1.78 72.6 -1.18 -0.37 16.8 84 7 2 6 5 4 1 2  
9 1.67 1.70 85.0 -2.75 -0.54 31.0 81 13 5 4 1 2 0 0  
10 1.34 1.34 101.2 -1.88 -0.44 25.5 85 10 4 6 4 3 0 0  
11 1.33 1.33 115.3 -2.01 -0.44 23.4 83 16 6 9 3 4 1 0  
12 1.73 1.82 118.2 -1.53 -0.48 16.2 87 10 6 11 5 3 0 0  
13 1.13 1.25 125.5 -1.69 -0.32 22.4 85 10 5 6 8 0 0 0  
14 1.23 1.65 137.7 -1.17 -0.06 19.5 78 16 5 6 11 9 0 0  GOQ 501 R
15 1.69 1.83 143.1 -1.87 -0.58 19.8 87 12 7 11 4 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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