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PDBsum entry 8xn4

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 8xn4 calculated with MOLE 2.0 PDB id
8xn4
Pores calculated on whole structure Pores calculated excluding ligands

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18 pores, coloured by radius 18 pores, coloured by radius 18 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.16 1.16 30.8 -0.84 -0.23 13.6 80 2 1 4 5 0 0 0  
2 1.77 1.79 42.8 -1.36 -0.24 19.6 84 6 3 2 4 2 1 0  
3 1.76 3.06 68.1 -0.85 -0.20 15.7 83 6 4 4 10 2 2 0  
4 1.17 1.60 69.9 0.17 0.10 10.7 82 4 4 4 12 3 2 0  
5 3.58 3.72 95.3 -1.61 -0.47 17.9 82 8 6 6 6 3 6 0  
6 4.43 4.44 98.9 -1.57 -0.52 11.9 80 3 11 12 3 3 4 0  
7 1.28 4.24 124.9 -0.47 0.06 12.6 81 7 5 5 18 8 2 0  
8 1.27 1.37 138.5 -1.12 -0.29 14.8 82 7 8 8 13 6 5 0  
9 1.28 2.16 144.7 -0.67 -0.18 13.9 81 7 11 6 16 5 5 0  
10 1.19 1.25 147.5 -1.23 -0.21 17.4 79 6 12 10 15 8 3 0  
11 1.32 2.27 149.1 -0.92 -0.32 10.8 81 5 15 13 11 6 4 0  
12 1.20 1.24 166.6 -1.42 -0.38 18.6 81 7 14 11 14 4 6 0  
13 1.68 2.77 174.2 -1.19 -0.29 16.8 83 11 8 7 15 4 6 0  
14 1.17 2.30 185.4 -1.35 -0.34 16.7 80 10 9 7 15 6 7 0  
15 1.32 2.08 192.7 -1.30 -0.27 16.4 79 11 8 8 14 10 6 0  
16 1.22 1.81 195.2 -0.96 -0.19 15.3 79 11 11 7 17 9 5 0  
17 1.20 2.17 201.2 -1.40 -0.31 17.5 80 13 8 8 15 7 9 0  
18 1.16 2.63 200.8 -1.53 -0.42 19.0 82 7 10 6 8 4 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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