 |
PDBsum entry 8x9t
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 8x9t calculated with MOLE 2.0
|
PDB id
|
|
|
|
8x9t
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
11 pores,
coloured by radius |
 |
12 pores,
coloured by radius
|
12 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.76 |
1.76 |
26.7 |
-2.68 |
-0.52 |
26.9 |
85 |
 |
6 |
0 |
4 |
0 |
1 |
0 |
0 |
 |
|
 |
 |
2 |
 |
2.54 |
2.72 |
26.8 |
-1.70 |
-0.50 |
14.7 |
88 |
4 |
2 |
5 |
3 |
2 |
0 |
0 |
|
 |
3 |
 |
1.75 |
1.75 |
27.6 |
-2.43 |
-0.54 |
23.4 |
86 |
5 |
1 |
4 |
1 |
1 |
0 |
0 |
|
 |
4 |
 |
2.54 |
2.72 |
32.0 |
-2.13 |
-0.54 |
20.3 |
89 |
7 |
4 |
5 |
3 |
1 |
0 |
0 |
|
 |
5 |
 |
2.21 |
2.48 |
32.7 |
-1.74 |
-0.51 |
17.5 |
89 |
5 |
2 |
6 |
2 |
2 |
0 |
0 |
|
 |
6 |
 |
2.20 |
2.47 |
37.9 |
-2.14 |
-0.54 |
22.1 |
89 |
8 |
4 |
6 |
2 |
1 |
0 |
0 |
|
 |
7 |
 |
1.48 |
3.17 |
52.3 |
-1.34 |
-0.60 |
14.5 |
87 |
5 |
2 |
7 |
2 |
1 |
2 |
2 |
|
 |
8 |
 |
1.16 |
1.36 |
89.0 |
-1.30 |
-0.44 |
16.0 |
89 |
7 |
3 |
9 |
5 |
2 |
1 |
0 |
|
 |
9 |
 |
1.16 |
1.37 |
90.9 |
-1.34 |
-0.40 |
14.8 |
89 |
6 |
2 |
11 |
4 |
2 |
1 |
0 |
|
 |
10 |
 |
1.22 |
1.45 |
102.4 |
-1.48 |
-0.38 |
16.8 |
91 |
6 |
3 |
13 |
7 |
2 |
1 |
0 |
|
 |
11 |
 |
1.22 |
1.37 |
113.7 |
-1.35 |
-0.40 |
17.4 |
89 |
10 |
5 |
11 |
8 |
4 |
1 |
0 |
|
 |
12 |
 |
1.22 |
1.52 |
25.9 |
1.27 |
0.50 |
1.5 |
64 |
0 |
0 |
3 |
4 |
5 |
0 |
1 |
YNH 901 R
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |