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PDBsum entry 8x9s

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8x9s calculated with MOLE 2.0 PDB id
8x9s
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.42 1.46 28.1 -0.33 -0.24 10.6 80 2 2 2 4 0 0 1  
2 1.40 1.45 28.5 -1.26 -0.56 15.2 85 2 3 2 3 0 0 1  
3 1.50 2.21 42.3 0.60 0.55 4.9 69 1 1 5 6 9 0 0  DHT 901 R
4 1.12 1.45 50.2 0.49 0.28 2.4 77 0 1 9 10 6 0 1  DHT 901 R
5 1.43 1.47 72.9 -0.63 -0.08 17.9 85 8 2 6 10 6 0 0  
6 2.44 2.53 79.7 -1.02 -0.24 20.6 82 8 3 5 7 6 0 0  
7 1.20 1.24 123.9 -1.13 -0.31 18.3 82 11 9 8 9 4 2 1  
8 1.45 1.45 157.1 -1.17 -0.21 19.2 86 10 11 12 10 7 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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