spacer
spacer

PDBsum entry 8x0h

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 8x0h calculated with MOLE 2.0 PDB id
8x0h
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.21 1.38 41.5 1.21 0.40 4.0 83 1 0 3 13 3 2 0  
2 1.22 1.33 48.3 0.68 0.22 4.6 83 2 1 4 13 2 2 1  
3 1.15 1.52 21.1 0.88 0.32 1.6 81 0 0 2 3 3 0 0  
4 1.23 1.23 20.6 -0.71 0.00 14.7 82 2 1 1 3 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer