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PDBsum entry 8x0g

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Pore analysis for: 8x0g calculated with MOLE 2.0 PDB id
8x0g
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.40 2.03 26.7 0.76 0.91 2.2 64 1 0 0 2 8 0 1  
2 1.73 1.89 30.8 -1.73 -0.42 19.4 86 6 1 4 3 1 0 0  
3 1.30 1.30 34.3 -1.10 -0.41 18.5 78 2 2 2 2 1 1 2  
4 3.81 5.53 34.8 -2.38 -0.14 28.1 85 4 2 2 3 2 0 0  
5 1.52 1.80 40.1 -0.51 0.08 12.4 74 3 1 2 3 5 1 1  
6 2.12 4.41 61.5 -0.56 -0.09 8.3 89 2 6 11 4 3 0 0  
7 1.37 1.57 68.5 -0.13 0.07 11.7 75 2 2 3 12 6 3 0  
8 1.19 2.47 73.5 -1.65 -0.08 20.7 84 5 5 6 4 4 0 0  
9 1.23 2.44 90.2 -1.82 -0.27 27.0 87 10 8 8 7 2 0 0  
10 1.29 1.50 91.3 -0.17 0.07 9.6 71 2 4 3 7 7 2 0  
11 1.20 1.39 106.9 0.29 0.37 7.3 73 1 3 1 12 11 2 1  
12 1.25 1.51 122.0 -0.49 0.05 13.1 78 6 5 3 12 6 3 0  
13 1.27 1.51 163.1 -0.49 0.03 12.6 79 8 6 4 17 7 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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