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PDBsum entry 8x0e

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Pore analysis for: 8x0e calculated with MOLE 2.0 PDB id
8x0e
Pores calculated on whole structure Pores calculated excluding ligands

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22 pores, coloured by radius 23 pores, coloured by radius 23 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.22 1.22 26.2 -0.51 -0.55 11.2 84 4 2 1 3 0 0 1  
2 3.03 3.26 26.4 -0.76 -0.25 22.1 87 6 3 1 4 0 0 0  
3 2.96 3.10 28.4 0.11 -0.18 12.1 84 4 3 1 4 1 0 0  
4 1.48 1.68 42.8 -0.85 -0.32 12.5 84 2 2 5 3 2 1 0  
5 1.17 1.17 45.7 -0.86 -0.64 10.0 89 2 3 3 3 1 1 0  NAG 901 A
6 1.53 2.24 51.2 -2.45 -0.62 21.5 83 3 4 4 1 1 1 0  
7 1.43 1.41 53.4 -1.37 -0.40 13.2 86 4 7 10 3 4 0 0  QUS 902 B
8 1.65 1.67 60.2 -1.74 -0.36 20.6 79 2 5 3 4 3 1 0  
9 1.45 1.48 70.6 -1.43 -0.17 17.3 86 6 6 9 5 4 0 0  QUS 902 A
10 2.35 2.85 94.0 -2.14 -0.41 21.4 82 3 7 6 3 2 2 0  
11 1.47 1.63 28.9 0.07 0.18 11.7 83 2 0 1 5 1 1 1  
12 1.25 1.25 34.3 -0.04 0.00 6.6 78 1 0 1 6 2 2 1  
13 1.12 1.29 45.9 0.88 0.28 5.2 74 0 1 1 6 3 2 2  
14 1.26 1.25 48.5 0.51 0.33 7.7 68 0 2 0 6 5 3 0  
15 2.56 5.05 50.8 1.03 0.72 7.7 71 3 1 2 6 9 1 1  
16 1.37 1.73 52.3 1.19 0.53 2.4 69 1 0 1 7 4 1 1  
17 1.18 1.36 62.8 0.73 0.29 4.4 73 1 1 3 9 4 2 2  
18 1.44 1.77 71.1 1.81 0.74 4.4 78 1 1 2 17 7 2 1  
19 1.57 1.76 73.0 0.92 0.56 7.1 76 4 0 4 13 7 1 2  
20 1.27 1.26 79.9 0.82 0.42 4.6 71 1 2 2 9 7 3 0  
21 1.33 1.68 88.8 1.11 0.51 5.2 78 1 1 3 17 8 3 0  
22 1.17 1.28 108.3 0.65 0.44 8.9 78 5 2 4 12 7 1 1  
23 1.11 1.44 120.1 -0.34 -0.02 12.6 76 9 4 3 11 5 2 3  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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