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PDBsum entry 8x0c

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Pore analysis for: 8x0c calculated with MOLE 2.0 PDB id
8x0c
Pores calculated on whole structure Pores calculated excluding ligands

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25 pores, coloured by radius 26 pores, coloured by radius 26 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.72 2.99 29.0 -1.24 -0.17 28.7 87 8 2 1 4 0 0 0  
2 1.88 1.88 30.1 -0.96 -0.25 14.2 86 3 3 6 5 2 0 0  
3 1.17 2.44 33.2 -1.35 -0.14 11.2 89 4 1 6 4 2 0 0  
4 2.46 2.96 35.8 -1.67 -0.51 23.2 79 5 3 0 1 1 0 2  
5 1.88 1.88 37.2 -1.66 -0.52 19.1 89 3 5 8 5 1 0 0  
6 1.12 2.99 41.5 -1.67 -0.52 17.7 85 2 6 9 4 3 0 0  
7 1.76 1.95 54.5 -1.63 -0.51 18.4 86 3 5 5 2 1 1 0  
8 1.22 2.99 55.6 -1.15 -0.28 8.3 89 5 1 13 8 3 0 0  
9 1.11 2.97 60.3 -1.17 -0.33 7.7 87 4 2 13 7 4 0 0  
10 1.10 3.01 61.3 -1.83 -0.39 18.9 84 9 3 7 4 3 0 0  
11 1.15 3.18 62.5 -1.75 -0.41 20.7 87 6 5 8 5 2 0 0  
12 1.78 1.97 69.4 -1.85 -0.52 21.2 85 5 8 6 2 1 1 0  
13 1.29 2.94 75.7 -1.55 -0.13 19.4 86 7 3 8 7 4 0 0  
14 1.29 3.21 76.6 -2.15 -0.48 22.4 88 7 8 11 6 2 0 0  
15 1.35 2.98 78.7 -1.57 -0.24 19.6 85 6 6 8 6 4 0 0  
16 1.28 3.01 81.1 -1.95 -0.57 18.6 87 5 6 11 6 3 0 0  
17 1.19 1.37 25.3 1.07 0.27 4.7 87 1 1 1 8 1 0 1  
18 1.14 1.38 42.2 0.48 0.23 6.4 79 2 0 1 9 2 2 2  
19 1.47 2.04 50.7 1.92 0.81 4.0 73 1 0 0 11 4 1 0  XQT 903 A
20 1.41 2.06 63.4 0.54 0.43 9.4 79 2 2 1 12 5 2 1  
21 1.12 1.34 65.4 -0.57 0.22 13.3 76 5 1 3 6 6 1 1  
22 1.12 1.34 68.6 0.17 0.38 6.8 73 2 1 0 10 6 1 3  
23 1.34 3.34 68.9 1.67 0.82 4.2 70 1 0 0 12 8 1 1  XQT 903 B
24 1.23 1.45 92.0 0.31 0.11 4.7 76 0 2 6 11 8 4 2  
25 1.41 2.30 115.5 0.32 0.17 8.8 79 2 2 4 18 7 3 0  
26 1.24 2.08 128.6 0.21 0.22 8.9 81 4 2 6 21 7 3 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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