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PDBsum entry 8x0c
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Pore analysis for: 8x0c calculated with MOLE 2.0
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PDB id
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8x0c
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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25 pores,
coloured by radius |
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26 pores,
coloured by radius
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26 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.72 |
2.99 |
29.0 |
-1.24 |
-0.17 |
28.7 |
87 |
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8 |
2 |
1 |
4 |
0 |
0 |
0 |
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2 |
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1.88 |
1.88 |
30.1 |
-0.96 |
-0.25 |
14.2 |
86 |
3 |
3 |
6 |
5 |
2 |
0 |
0 |
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3 |
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1.17 |
2.44 |
33.2 |
-1.35 |
-0.14 |
11.2 |
89 |
4 |
1 |
6 |
4 |
2 |
0 |
0 |
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4 |
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2.46 |
2.96 |
35.8 |
-1.67 |
-0.51 |
23.2 |
79 |
5 |
3 |
0 |
1 |
1 |
0 |
2 |
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5 |
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1.88 |
1.88 |
37.2 |
-1.66 |
-0.52 |
19.1 |
89 |
3 |
5 |
8 |
5 |
1 |
0 |
0 |
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6 |
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1.12 |
2.99 |
41.5 |
-1.67 |
-0.52 |
17.7 |
85 |
2 |
6 |
9 |
4 |
3 |
0 |
0 |
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7 |
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1.76 |
1.95 |
54.5 |
-1.63 |
-0.51 |
18.4 |
86 |
3 |
5 |
5 |
2 |
1 |
1 |
0 |
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8 |
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1.22 |
2.99 |
55.6 |
-1.15 |
-0.28 |
8.3 |
89 |
5 |
1 |
13 |
8 |
3 |
0 |
0 |
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9 |
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1.11 |
2.97 |
60.3 |
-1.17 |
-0.33 |
7.7 |
87 |
4 |
2 |
13 |
7 |
4 |
0 |
0 |
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10 |
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1.10 |
3.01 |
61.3 |
-1.83 |
-0.39 |
18.9 |
84 |
9 |
3 |
7 |
4 |
3 |
0 |
0 |
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11 |
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1.15 |
3.18 |
62.5 |
-1.75 |
-0.41 |
20.7 |
87 |
6 |
5 |
8 |
5 |
2 |
0 |
0 |
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12 |
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1.78 |
1.97 |
69.4 |
-1.85 |
-0.52 |
21.2 |
85 |
5 |
8 |
6 |
2 |
1 |
1 |
0 |
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13 |
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1.29 |
2.94 |
75.7 |
-1.55 |
-0.13 |
19.4 |
86 |
7 |
3 |
8 |
7 |
4 |
0 |
0 |
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14 |
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1.29 |
3.21 |
76.6 |
-2.15 |
-0.48 |
22.4 |
88 |
7 |
8 |
11 |
6 |
2 |
0 |
0 |
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15 |
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1.35 |
2.98 |
78.7 |
-1.57 |
-0.24 |
19.6 |
85 |
6 |
6 |
8 |
6 |
4 |
0 |
0 |
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16 |
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1.28 |
3.01 |
81.1 |
-1.95 |
-0.57 |
18.6 |
87 |
5 |
6 |
11 |
6 |
3 |
0 |
0 |
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17 |
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1.19 |
1.37 |
25.3 |
1.07 |
0.27 |
4.7 |
87 |
1 |
1 |
1 |
8 |
1 |
0 |
1 |
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18 |
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1.14 |
1.38 |
42.2 |
0.48 |
0.23 |
6.4 |
79 |
2 |
0 |
1 |
9 |
2 |
2 |
2 |
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19 |
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1.47 |
2.04 |
50.7 |
1.92 |
0.81 |
4.0 |
73 |
1 |
0 |
0 |
11 |
4 |
1 |
0 |
XQT 903 A
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20 |
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1.41 |
2.06 |
63.4 |
0.54 |
0.43 |
9.4 |
79 |
2 |
2 |
1 |
12 |
5 |
2 |
1 |
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21 |
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1.12 |
1.34 |
65.4 |
-0.57 |
0.22 |
13.3 |
76 |
5 |
1 |
3 |
6 |
6 |
1 |
1 |
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22 |
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1.12 |
1.34 |
68.6 |
0.17 |
0.38 |
6.8 |
73 |
2 |
1 |
0 |
10 |
6 |
1 |
3 |
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23 |
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1.34 |
3.34 |
68.9 |
1.67 |
0.82 |
4.2 |
70 |
1 |
0 |
0 |
12 |
8 |
1 |
1 |
XQT 903 B
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24 |
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1.23 |
1.45 |
92.0 |
0.31 |
0.11 |
4.7 |
76 |
0 |
2 |
6 |
11 |
8 |
4 |
2 |
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25 |
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1.41 |
2.30 |
115.5 |
0.32 |
0.17 |
8.8 |
79 |
2 |
2 |
4 |
18 |
7 |
3 |
0 |
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26 |
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1.24 |
2.08 |
128.6 |
0.21 |
0.22 |
8.9 |
81 |
4 |
2 |
6 |
21 |
7 |
3 |
1 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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